IL_9SYR_090
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- CG*CGG
- Length
- 5 nucleotides
- Bulged bases
- 9SYR|1|L1|G|2711
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SYR_090 not in the Motif Atlas
- Homologous match to IL_8GLP_102
- Geometric discrepancy: 0.2184
- The information below is about IL_8GLP_102
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_28408.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 83
Unit IDs
9SYR|1|L1|C|2704
9SYR|1|L1|G|2705
*
9SYR|1|L1|C|2710
9SYR|1|L1|G|2711
9SYR|1|L1|G|2712
Current chains
- Chain L1
- 28S rRNA
Nearby chains
- Chain Li
- 60S ribosomal protein L19
- Chain Ll
- 60S ribosomal protein L22
- Chain Lo
- 60S ribosomal protein L23a
- Chain Nb
- Isoform 2 of Transcription factor BTF3
- Chain Nm
- Methionine aminopeptidase 1
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