IL_9SYR_109
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- GUU*AC
- Length
- 5 nucleotides
- Bulged bases
- 9SYR|1|L1|U|3914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SYR_109 not in the Motif Atlas
- Homologous match to IL_8GLP_130
- Geometric discrepancy: 0.0792
- The information below is about IL_8GLP_130
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.8
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 192
Unit IDs
9SYR|1|L1|G|3913
9SYR|1|L1|U|3914
9SYR|1|L1|U|3915
*
9SYR|1|L1|A|4388
9SYR|1|L1|C|4389
Current chains
- Chain L1
- 28S rRNA
Nearby chains
- Chain LN
- Green fluorescent protein,Small ubiquitin-related modifier 1,Green fluorescent protein,Small ubiquitin-related modifier 1,Histone H4,X-box-binding protein 1,X-box-binding protein 1
- Chain Lc
- 60S ribosomal protein L4
- Chain Lr
- 60S ribosomal protein L27a
Coloring options: