IL_9SYR_113
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 9SYR|1|L1|A|4203
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SYR_113 not in the Motif Atlas
- Homologous match to IL_9PN5_094
- Geometric discrepancy: 0.0808
- The information below is about IL_9PN5_094
- Detailed Annotation
- AG tHS outside loop
- Broad Annotation
- AG tHS outside loop
- Motif group
- IL_14190.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 188
Unit IDs
9SYR|1|L1|G|4191
9SYR|1|L1|A|4192
*
9SYR|1|L1|U|4202
9SYR|1|L1|A|4203
9SYR|1|L1|C|4204
Current chains
- Chain L1
- 28S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L36a
- Chain LM
- 60S ribosomal protein L10
- Chain Lk
- 60S ribosomal protein L21
- Chain Ls
- 60S ribosomal protein L29
- Chain S3
- Transfer RNA; tRNA
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