IL_9SYR_128

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

UUG*CCAAG

Length

8 nucleotides

Bulged bases

9SYR|1|L1|A|4488

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L1|U|4468
9SYR|1|L1|U|4469
9SYR|1|L1|G|4470
*
9SYR|1|L1|C|4485
9SYR|1|L1|C|4486
9SYR|1|L1|A|4487
9SYR|1|L1|A|4488
9SYR|1|L1|G|4489

Current chains

Chain L1

28S rRNA

Nearby chains

Chain LD

Ubiquitin-60S ribosomal protein L40

Chain LK

60S ribosomal protein L9