IL_9SYR_143
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- CCUCGGAUAG*UGCGGAGUG
- Length
- 19 nucleotides
- Bulged bases
- 9SYR|1|L1|C|4757, 9SYR|1|L1|U|4758, 9SYR|1|L1|A|4764, 9SYR|1|L1|G|4870, 9SYR|1|L1|C|4871, 9SYR|1|L1|G|4873, 9SYR|1|L1|U|4876
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SYR|1|L1|C|4756
9SYR|1|L1|C|4757
9SYR|1|L1|U|4758
9SYR|1|L1|C|4759
9SYR|1|L1|G|4760
9SYR|1|L1|G|4761
9SYR|1|L1|A|4762
9SYR|1|L1|U|4763
9SYR|1|L1|A|4764
9SYR|1|L1|G|4765
*
9SYR|1|L1|U|4869
9SYR|1|L1|G|4870
9SYR|1|L1|C|4871
9SYR|1|L1|G|4872
9SYR|1|L1|G|4873
9SYR|1|L1|A|4874
9SYR|1|L1|G|4875
9SYR|1|L1|U|4876
9SYR|1|L1|G|4877
Current chains
- Chain L1
- 28S rRNA
Nearby chains
- Chain LK
- 60S ribosomal protein L9
- Chain LQ
- 60S ribosomal protein L14
- Chain Le
- Large ribosomal subunit protein eL6
- Chain Lf
- Large ribosomal subunit protein uL13
- Chain Lj
- 60S ribosomal protein L18a
Coloring options: