3D structure

PDB id
9SYR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
Experimental method
ELECTRON MICROSCOPY
Resolution
3.55 Å

Loop

Sequence
UCCUG*CGUCA
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9SYR|1|L1|U|4885
9SYR|1|L1|C|4886
9SYR|1|L1|C|4887
9SYR|1|L1|U|4888
9SYR|1|L1|G|4889
*
9SYR|1|L1|C|4930
9SYR|1|L1|G|4931
9SYR|1|L1|U|4932
9SYR|1|L1|C|4933
9SYR|1|L1|A|4934

Current chains

Chain L1
28S rRNA

Nearby chains

Chain LQ
60S ribosomal protein L14
Chain Le
Large ribosomal subunit protein eL6
Chain Lf
Large ribosomal subunit protein uL13

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0803 s