IL_9SYR_176

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CA(PSU)U*ACCUCGGG

Length

12 nucleotides

Bulged bases

9SYR|1|S1|U|305, 9SYR|1|S1|G|307

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|C|216
9SYR|1|S1|A|217
9SYR|1|S1|PSU|218
9SYR|1|S1|U|219
*
9SYR|1|S1|A|302
9SYR|1|S1|C|303
9SYR|1|S1|C|304
9SYR|1|S1|U|305
9SYR|1|S1|C|306
9SYR|1|S1|G|307
9SYR|1|S1|G|308
9SYR|1|S1|G|309

Current chains

Chain S1

18S rRNA

Nearby chains

Chain SA

40S ribosomal protein S8

Chain Sw

Small ribosomal subunit protein eS4, X isoform