IL_9SYR_205

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GAAAAAA(PSU)(PSU)*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|G|807
9SYR|1|S1|A|808
9SYR|1|S1|A|809
9SYR|1|S1|A|810
9SYR|1|S1|A|811
9SYR|1|S1|A|812
9SYR|1|S1|A|813
9SYR|1|S1|PSU|814
9SYR|1|S1|PSU|815
*
9SYR|1|S1|A|849
9SYR|1|S1|C|850
9SYR|1|S1|C|851
9SYR|1|S1|G|852
9SYR|1|S1|C|853
9SYR|1|S1|A|854
9SYR|1|S1|G|855
9SYR|1|S1|C|856

Current chains

Chain S1

18S rRNA

Nearby chains

Chain SB

40S ribosomal protein S9

Chain SD

40S ribosomal protein S11

Chain Sf

40S ribosomal protein S15a

Chain Sw

Small ribosomal subunit protein eS4, X isoform