IL_9SYR_229

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

A(OMU)UG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|A|1287
9SYR|1|S1|OMU|1288
9SYR|1|S1|U|1289
9SYR|1|S1|G|1290
*
9SYR|1|S1|C|1309
9SYR|1|S1|U|1310
9SYR|1|S1|C|1311
9SYR|1|S1|G|1312
9SYR|1|S1|A|1313
9SYR|1|S1|U|1314

Current chains

Chain S1

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S10

Chain SH

40S ribosomal protein S12

Chain Sp

40S ribosomal protein S29

Chain Sr

Ubiquitin