IL_9SYR_243
3D structure
- PDB id
- 9SYR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.55 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 9SYR|1|S1|U|1585, 9SYR|1|S1|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SYR|1|S1|G|1541
9SYR|1|S1|C|1542
9SYR|1|S1|U|1543
9SYR|1|S1|C|1544
9SYR|1|S1|A|1545
9SYR|1|S1|G|1546
9SYR|1|S1|C|1547
9SYR|1|S1|G|1548
9SYR|1|S1|U|1549
9SYR|1|S1|G|1550
*
9SYR|1|S1|C|1582
9SYR|1|S1|C|1583
9SYR|1|S1|G|1584
9SYR|1|S1|U|1585
9SYR|1|S1|U|1586
9SYR|1|S1|G|1587
9SYR|1|S1|A|1588
9SYR|1|S1|A|1589
9SYR|1|S1|C|1590
9SYR|1|S1|C|1591
9SYR|1|S1|C|1592
Current chains
- Chain S1
- 18S rRNA
Nearby chains
- Chain SC
- 40S ribosomal protein S5
- Chain Sc
- 40S ribosomal protein S16
- Chain Si
- Small ribosomal subunit protein eS19
- Chain Sl
- 40S ribosomal protein S20
- Chain Sm
- 40S ribosomal protein S25
- Chain Sp
- 40S ribosomal protein S29
- Chain Sx
- 40S ribosomal protein S3
Coloring options: