IL_9SYR_246

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|G|1604
9SYR|1|S1|G|1605
9SYR|1|S1|G|1606
9SYR|1|S1|A|1607
9SYR|1|S1|U|1608
9SYR|1|S1|C|1609
9SYR|1|S1|G|1610
*
9SYR|1|S1|C|1629
9SYR|1|S1|A|1630
9SYR|1|S1|U|1631
9SYR|1|S1|G|1632
9SYR|1|S1|A|1633
9SYR|1|S1|A|1634
9SYR|1|S1|C|1635

Current chains

Chain S1

18S rRNA

Nearby chains

Chain Sd

Small ribosomal subunit protein uS13

Chain Si

Small ribosomal subunit protein eS19

Chain Sm

40S ribosomal protein S25