IL_9T0Y_024
3D structure
- PDB id
- 9T0Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome from delta-9 strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.87 Å
Loop
- Sequence
- G(PSU)GCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 9T0Y|1|A|A|532, 9T0Y|1|A|U|534, 9T0Y|1|A|A|535
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9T0Y|1|A|G|515
9T0Y|1|A|PSU|516
9T0Y|1|A|G|517
9T0Y|1|A|C|518
9T0Y|1|A|C|519
9T0Y|1|A|A|520
9T0Y|1|A|G|521
*
9T0Y|1|A|C|528
9T0Y|1|A|G|529
9T0Y|1|A|G|530
9T0Y|1|A|U|531
9T0Y|1|A|A|532
9T0Y|1|A|A|533
9T0Y|1|A|U|534
9T0Y|1|A|A|535
9T0Y|1|A|C|536
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain D
- Small ribosomal subunit protein uS4
- Chain L
- Small ribosomal subunit protein uS12
- Chain X
- mRNA
- Chain Y
- Transfer RNA; tRNA
Coloring options: