3D structure

PDB id
9T0Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome from delta-9 strain
Experimental method
ELECTRON MICROSCOPY
Resolution
1.87 Å

Loop

Sequence
GGAACUG*CUAAGUAC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9T0Y|1|a|G|188
9T0Y|1|a|G|189
9T0Y|1|a|A|190
9T0Y|1|a|A|191
9T0Y|1|a|C|192
9T0Y|1|a|U|193
9T0Y|1|a|G|194
*
9T0Y|1|a|C|201
9T0Y|1|a|U|202
9T0Y|1|a|A|203
9T0Y|1|a|A|204
9T0Y|1|a|G|205
9T0Y|1|a|U|206
9T0Y|1|a|A|207
9T0Y|1|a|C|208

Current chains

Chain a
23S rRNA

Nearby chains

Chain 1
Large ribosomal subunit protein bL34
Chain 2
Large ribosomal subunit protein bL35
Chain k
Large ribosomal subunit protein uL15
Chain w
Large ribosomal subunit protein bL28

Coloring options:

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