3D structure

PDB id
9T0Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome from delta-9 strain
Experimental method
ELECTRON MICROSCOPY
Resolution
1.87 Å

Loop

Sequence
GAAC*GAGUGAAAAAGAAC
Length
18 nucleotides
Bulged bases
9T0Y|1|a|A|504, 9T0Y|1|a|A|508
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9T0Y|1|a|G|481
9T0Y|1|a|A|482
9T0Y|1|a|A|483
9T0Y|1|a|C|484
*
9T0Y|1|a|G|496
9T0Y|1|a|A|497
9T0Y|1|a|G|498
9T0Y|1|a|U|499
9T0Y|1|a|G|500
9T0Y|1|a|A|501
9T0Y|1|a|A|502
9T0Y|1|a|A|503
9T0Y|1|a|A|504
9T0Y|1|a|A|505
9T0Y|1|a|G|506
9T0Y|1|a|A|507
9T0Y|1|a|A|508
9T0Y|1|a|C|509

Current chains

Chain a
23S rRNA

Nearby chains

Chain r
Large ribosomal subunit protein uL22
Chain t
Large ribosomal subunit protein uL24

Coloring options:

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