IL_9T0Y_137

3D structure

PDB id

9T0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-9 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T0Y|1|a|U|1851
9T0Y|1|a|U|1852
9T0Y|1|a|A|1853
9T0Y|1|a|A|1854
9T0Y|1|a|U|1855
9T0Y|1|a|U|1856
9T0Y|1|a|G|1857
9T0Y|1|a|A|1858
9T0Y|1|a|U|1859
9T0Y|1|a|G|1860
*
9T0Y|1|a|U|1882
9T0Y|1|a|U|1883
9T0Y|1|a|G|1884
9T0Y|1|a|A|1885
9T0Y|1|a|U|1886
9T0Y|1|a|C|1887
9T0Y|1|a|G|1888
9T0Y|1|a|A|1889
9T0Y|1|a|A|1890
9T0Y|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains

Chain 5

Transfer RNA; tRNA