IL_9T0Z_024

3D structure

PDB id

9T0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

HPFcold Bound Hibernating C. burnetii 30S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

CUC*GGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9T0Z_024 not in the Motif Atlas

Geometric match to IL_8P9A_384

Geometric discrepancy: 0.1935

The information below is about IL_8P9A_384

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87720.2

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

7

Unit IDs

9T0Z|1|A|C|453
9T0Z|1|A|U|454
9T0Z|1|A|C|455
*
9T0Z|1|A|G|471
9T0Z|1|A|G|472
9T0Z|1|A|G|473

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain P

Small ribosomal subunit protein bS16