3D structure

PDB id
9T0Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
HPFcold Bound Hibernating C. burnetii 30S Ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.87 Å

Loop

Sequence
GUACAAAG*CAGAAAAC
Length
16 nucleotides
Bulged bases
9T0Z|1|A|G|1283
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9T0Z|1|A|G|1243
9T0Z|1|A|U|1244
9T0Z|1|A|A|1245
9T0Z|1|A|C|1246
9T0Z|1|A|A|1247
9T0Z|1|A|A|1248
9T0Z|1|A|A|1249
9T0Z|1|A|G|1250
*
9T0Z|1|A|C|1281
9T0Z|1|A|A|1282
9T0Z|1|A|G|1283
9T0Z|1|A|A|1284
9T0Z|1|A|A|1285
9T0Z|1|A|A|1286
9T0Z|1|A|A|1287
9T0Z|1|A|C|1288

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain G
Small ribosomal subunit protein uS7
Chain I
Small ribosomal subunit protein uS9
Chain J
Small ribosomal subunit protein uS10
Chain N
Small ribosomal subunit protein uS14

Coloring options:

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