IL_9T1F_003

3D structure

PDB id

9T1F (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-RlmE strain, PTC class 5

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

GAAAC*GAGAUAGC

Length

13 nucleotides

Bulged bases

9T1F|1|a|G|801, 9T1F|1|a|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T1F|1|a|G|674
9T1F|1|a|A|675
9T1F|1|a|A|676
9T1F|1|a|A|677
9T1F|1|a|C|678
*
9T1F|1|a|G|799
9T1F|1|a|A|800
9T1F|1|a|G|801
9T1F|1|a|A|802
9T1F|1|a|U|803
9T1F|1|a|A|804
9T1F|1|a|G|805
9T1F|1|a|C|806

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

Large ribosomal subunit protein uL4

Chain k

Large ribosomal subunit protein uL15