IL_9T4R_033
3D structure
- PDB id
- 9T4R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S initiation complex with a natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GGGAUC*GUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T4R_033 not in the Motif Atlas
- Geometric match to IL_8GLP_241
- Geometric discrepancy: 0.0832
- The information below is about IL_8GLP_241
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31359.2
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9T4R|1|A|G|782
9T4R|1|A|G|783
9T4R|1|A|G|784
9T4R|1|A|A|785
9T4R|1|A|U|786
9T4R|1|A|C|787
*
9T4R|1|A|G|811
9T4R|1|A|U|812
9T4R|1|A|C|813
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain K
- Small ribosomal subunit protein uS11
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain c
- Large ribosomal subunit protein uL2
Coloring options: