IL_9T4R_091
3D structure
- PDB id
- 9T4R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S initiation complex with a natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GCG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 9T4R|1|a|C|821, 9T4R|1|a|A|833, 9T4R|1|a|A|834, 9T4R|1|a|U|835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T4R_091 not in the Motif Atlas
- Geometric match to IL_8B0X_085
- Geometric discrepancy: 0.0848
- The information below is about IL_8B0X_085
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
9T4R|1|a|G|820
9T4R|1|a|C|821
9T4R|1|a|G|822
*
9T4R|1|a|C|832
9T4R|1|a|A|833
9T4R|1|a|A|834
9T4R|1|a|U|835
9T4R|1|a|C|836
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL34
- Chain c
- Large ribosomal subunit protein uL2
- Chain e
- Large ribosomal subunit protein uL4
- Chain r
- Large ribosomal subunit protein uL22
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