IL_9T4R_120
3D structure
- PDB id
- 9T4R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S initiation complex with a natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T4R_120 not in the Motif Atlas
- Homologous match to IL_7A0S_048
- Geometric discrepancy: 0.0785
- The information below is about IL_7A0S_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.4
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
9T4R|1|a|C|1388
9T4R|1|a|U|1389
9T4R|1|a|A|1390
9T4R|1|a|A|1391
9T4R|1|a|G|1392
*
9T4R|1|a|C|1413
9T4R|1|a|G|1414
9T4R|1|a|A|1415
9T4R|1|a|U|1416
9T4R|1|a|G|1417
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL34
- Chain c
- Large ribosomal subunit protein uL2
Coloring options: