IL_9T4R_123

3D structure

PDB id

9T4R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S initiation complex with a natural mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

CGUUUUAAU*AUAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T4R|1|a|C|1452
9T4R|1|a|G|1453
9T4R|1|a|U|1454
9T4R|1|a|U|1455
9T4R|1|a|U|1456
9T4R|1|a|U|1457
9T4R|1|a|A|1458
9T4R|1|a|A|1459
9T4R|1|a|U|1460
*
9T4R|1|a|A|1626
9T4R|1|a|U|1627
9T4R|1|a|A|1628
9T4R|1|a|G|1629

Current chains

Chain a

23S rRNA

Nearby chains