IL_9T4R_154

3D structure

PDB id

9T4R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S initiation complex with a natural mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GGAG*CGCUGGUGGGAUAC

Length

18 nucleotides

Bulged bases

9T4R|1|a|G|2150, 9T4R|1|a|C|2188, 9T4R|1|a|U|2192, 9T4R|1|a|G|2193, 9T4R|1|a|U|2197

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T4R|1|a|G|2149
9T4R|1|a|G|2150
9T4R|1|a|A|2151
9T4R|1|a|G|2152
*
9T4R|1|a|C|2186
9T4R|1|a|G|2187
9T4R|1|a|C|2188
9T4R|1|a|U|2189
9T4R|1|a|G|2190
9T4R|1|a|G|2191
9T4R|1|a|U|2192
9T4R|1|a|G|2193
9T4R|1|a|G|2194
9T4R|1|a|G|2195
9T4R|1|a|A|2196
9T4R|1|a|U|2197
9T4R|1|a|A|2198
9T4R|1|a|C|2199

Current chains

Chain a

23S rRNA

Nearby chains