IL_9T4R_155

3D structure

PDB id

9T4R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S initiation complex with a natural mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

CUUUGAAACG*CGUGGAG

Length

17 nucleotides

Bulged bases

9T4R|1|a|U|2156, 9T4R|1|a|A|2160

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T4R|1|a|C|2154
9T4R|1|a|U|2155
9T4R|1|a|U|2156
9T4R|1|a|U|2157
9T4R|1|a|G|2158
9T4R|1|a|A|2159
9T4R|1|a|A|2160
9T4R|1|a|A|2161
9T4R|1|a|C|2162
9T4R|1|a|G|2163
*
9T4R|1|a|C|2178
9T4R|1|a|G|2179
9T4R|1|a|U|2180
9T4R|1|a|G|2181
9T4R|1|a|G|2182
9T4R|1|a|A|2183
9T4R|1|a|G|2184

Current chains

Chain a

23S rRNA

Nearby chains