IL_9T6M_071

3D structure

PDB id

9T6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

GGAACUG*CUAAGUAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T6M|1|a|G|188
9T6M|1|a|G|189
9T6M|1|a|A|190
9T6M|1|a|A|191
9T6M|1|a|C|192
9T6M|1|a|U|193
9T6M|1|a|G|194
*
9T6M|1|a|C|201
9T6M|1|a|U|202
9T6M|1|a|A|203
9T6M|1|a|A|204
9T6M|1|a|G|205
9T6M|1|a|U|206
9T6M|1|a|A|207
9T6M|1|a|C|208

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34

Chain 2

Large ribosomal subunit protein bL35

Chain k

Large ribosomal subunit protein uL15

Chain w

Large ribosomal subunit protein bL28