IL_9T6M_076

3D structure

PDB id

9T6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

GAAC*GAGUGAAAAAGAAC

Length

18 nucleotides

Bulged bases

9T6M|1|a|A|504, 9T6M|1|a|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T6M|1|a|G|481
9T6M|1|a|A|482
9T6M|1|a|A|483
9T6M|1|a|C|484
*
9T6M|1|a|G|496
9T6M|1|a|A|497
9T6M|1|a|G|498
9T6M|1|a|U|499
9T6M|1|a|G|500
9T6M|1|a|A|501
9T6M|1|a|A|502
9T6M|1|a|A|503
9T6M|1|a|A|504
9T6M|1|a|A|505
9T6M|1|a|G|506
9T6M|1|a|A|507
9T6M|1|a|A|508
9T6M|1|a|C|509

Current chains

Chain a

23S rRNA

Nearby chains

Chain r

Large ribosomal subunit protein uL22

Chain t

Large ribosomal subunit protein uL24