IL_9T6M_109

3D structure

PDB id

9T6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

AUAAGUAA*UGAAAUU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T6M|1|a|A|1262
9T6M|1|a|U|1263
9T6M|1|a|A|1264
9T6M|1|a|A|1265
9T6M|1|a|G|1266
9T6M|1|a|U|1267
9T6M|1|a|A|1268
9T6M|1|a|A|1269
*
9T6M|1|a|U|2011
9T6M|1|a|G|2012
9T6M|1|a|A|2013
9T6M|1|a|A|2014
9T6M|1|a|A|2015
9T6M|1|a|U|2016
9T6M|1|a|U|2017

Current chains

Chain a

23S rRNA

Nearby chains

Chain r

Large ribosomal subunit protein uL22

Chain z

Large ribosomal subunit protein bL32