IL_9T7H_091
3D structure
- PDB id
- 9T7H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- GCGCAGCGUAG*CC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T7H_091 not in the Motif Atlas
- Geometric match to IL_3U4M_002
- Geometric discrepancy: 0.1773
- The information below is about IL_3U4M_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32056.1
- Basepair signature
- cWW-L-cWW-L-L-tWH-R-L-R-L
- Number of instances in this motif group
- 3
Unit IDs
9T7H|1|1|G|2350
9T7H|1|1|C|2351
9T7H|1|1|G|2352
9T7H|1|1|C|2353
9T7H|1|1|A|2354
9T7H|1|1|G|2355
9T7H|1|1|C|2356
9T7H|1|1|G|2357
9T7H|1|1|U|2358
9T7H|1|1|A|2359
9T7H|1|1|G|2360
*
9T7H|1|1|C|2418
9T7H|1|1|C|2419
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain BA
- Large ribosomal subunit protein uL1
- Chain H
- Dehydrogenase
Coloring options: