IL_9T8Q_003

3D structure

PDB id

9T8Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain, PTC class 6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

GAAAC*GAGAUAGC

Length

13 nucleotides

Bulged bases

9T8Q|1|a|G|801, 9T8Q|1|a|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T8Q|1|a|G|674
9T8Q|1|a|A|675
9T8Q|1|a|A|676
9T8Q|1|a|A|677
9T8Q|1|a|C|678
*
9T8Q|1|a|G|799
9T8Q|1|a|A|800
9T8Q|1|a|G|801
9T8Q|1|a|A|802
9T8Q|1|a|U|803
9T8Q|1|a|A|804
9T8Q|1|a|G|805
9T8Q|1|a|C|806

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

Large ribosomal subunit protein uL4

Chain k

Large ribosomal subunit protein uL15