IL_9TEZ_089
3D structure
- PDB id
- 9TEZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- DalDroS bound to the Escherichia coli 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TEZ_089 not in the Motif Atlas
- Homologous match to IL_7A0S_087
- Geometric discrepancy: 0.1299
- The information below is about IL_7A0S_087
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.3
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 18
Unit IDs
9TEZ|1|V|C|2466
9TEZ|1|V|C|2467
9TEZ|1|V|A|2468
9TEZ|1|V|A|2469
9TEZ|1|V|G|2470
*
9TEZ|1|V|C|2480
9TEZ|1|V|G|2481
9TEZ|1|V|A|2482
9TEZ|1|V|C|2483
9TEZ|1|V|G|2484
Current chains
- Chain V
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL36A
- Chain W
- Peptide chain release factor RF1
- Chain l
- Large ribosomal subunit protein uL16
Coloring options: