IL_9TI5_005
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGGAG*CUUUGAUC
- Length
- 13 nucleotides
- Bulged bases
- 9TI5|1|A|U|100
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI5_005 not in the Motif Atlas
- Geometric match to IL_4WF9_004
- Geometric discrepancy: 0.1254
- The information below is about IL_4WF9_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.2
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
9TI5|1|A|G|81
9TI5|1|A|G|82
9TI5|1|A|G|83
9TI5|1|A|A|84
9TI5|1|A|G|85
*
9TI5|1|A|C|97
9TI5|1|A|U|98
9TI5|1|A|U|99
9TI5|1|A|U|100
9TI5|1|A|G|101
9TI5|1|A|A|102
9TI5|1|A|U|103
9TI5|1|A|C|104
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L29
- Chain X
- 50S ribosomal protein L24
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