IL_9TI5_098
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 9TI5|1|A|G|2807
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI5_098 not in the Motif Atlas
- Homologous match to IL_7A0S_093
- Geometric discrepancy: 0.0879
- The information below is about IL_7A0S_093
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.4
- Basepair signature
- cWW-tSH-tHW-tHS-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
9TI5|1|A|U|2663
9TI5|1|A|U|2664
9TI5|1|A|G|2665
9TI5|1|A|A|2666
9TI5|1|A|G|2667
*
9TI5|1|A|C|2801
9TI5|1|A|A|2802
9TI5|1|A|A|2803
9TI5|1|A|G|2804
9TI5|1|A|A|2805
9TI5|1|A|U|2806
9TI5|1|A|G|2807
9TI5|1|A|A|2808
9TI5|1|A|G|2809
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L13
Coloring options: