IL_9TI5_099
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI5_099 not in the Motif Atlas
- Homologous match to IL_7A0S_094
- Geometric discrepancy: 0.1536
- The information below is about IL_7A0S_094
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.6
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
9TI5|1|A|U|2679
9TI5|1|A|U|2680
9TI5|1|A|A|2681
9TI5|1|A|G|2682
9TI5|1|A|U|2683
9TI5|1|A|A|2684
9TI5|1|A|C|2685
*
9TI5|1|A|G|2690
9TI5|1|A|G|2691
9TI5|1|A|A|2692
9TI5|1|A|C|2693
9TI5|1|A|C|2694
9TI5|1|A|G|2695
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain K
- Large ribosomal subunit protein uL6
Coloring options: