IL_9TI5_140

3D structure

PDB id

9TI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GUG*UAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TI5_140 not in the Motif Atlas

Geometric match to IL_8CRE_403

Geometric discrepancy: 0.2674

The information below is about IL_8CRE_403

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.4

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

25

Unit IDs

9TI5|1|a|G|664
9TI5|1|a|U|665
9TI5|1|a|G|666
*
9TI5|1|a|U|755
9TI5|1|a|A|756
9TI5|1|a|A|757
9TI5|1|a|C|758

Current chains

Chain a

16S rRNA

Nearby chains

Chain i

30S ribosomal protein S8

Chain p

30S ribosomal protein S15