IL_9TI5_172
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CCGAAG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI5_172 not in the Motif Atlas
- Geometric match to IL_9H3G_029
- Geometric discrepancy: 0.2052
- The information below is about IL_9H3G_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47352.3
- Basepair signature
- cWW-cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
9TI5|1|a|C|1440
9TI5|1|a|C|1441
9TI5|1|a|G|1442
9TI5|1|a|A|1443
9TI5|1|a|A|1444
9TI5|1|a|G|1445
*
9TI5|1|a|C|1477
9TI5|1|a|G|1478
9TI5|1|a|A|1479
9TI5|1|a|A|1480
9TI5|1|a|G|1481
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain N
- 50S ribosomal protein L14
- Chain S
- 50S ribosomal protein L19
- Chain u
- 30S ribosomal protein S20
Coloring options: