IL_9TI6_009
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- CUUAGUAG*CGAAACG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI6_009 not in the Motif Atlas
- Homologous match to IL_7A0S_007
- Geometric discrepancy: 0.117
- The information below is about IL_7A0S_007
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.5
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9TI6|1|A|C|241
9TI6|1|A|U|242
9TI6|1|A|U|243
9TI6|1|A|A|244
9TI6|1|A|G|245
9TI6|1|A|U|246
9TI6|1|A|A|247
9TI6|1|A|G|248
*
9TI6|1|A|C|256
9TI6|1|A|G|257
9TI6|1|A|A|258
9TI6|1|A|A|259
9TI6|1|A|A|260
9TI6|1|A|C|261
9TI6|1|A|G|262
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 8
- 50S ribosomal protein L35
- Chain O
- 50S ribosomal protein L15
Coloring options: