IL_9TI6_025
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- GCG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 9TI6|1|A|C|821, 9TI6|1|A|A|833, 9TI6|1|A|A|834, 9TI6|1|A|U|835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI6_025 not in the Motif Atlas
- Geometric match to IL_9E6Q_032
- Geometric discrepancy: 0.0722
- The information below is about IL_9E6Q_032
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.3
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
9TI6|1|A|G|820
9TI6|1|A|C|821
9TI6|1|A|G|822
*
9TI6|1|A|C|832
9TI6|1|A|A|833
9TI6|1|A|A|834
9TI6|1|A|U|835
9TI6|1|A|C|836
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L34
- Chain G
- 50S ribosomal protein L2
- Chain I
- 50S ribosomal protein L4
- Chain V
- 50S ribosomal protein L22
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