IL_9TI6_042
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- CCCAGACAA*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 9TI6|1|A|A|1090
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI6_042 not in the Motif Atlas
- Geometric match to IL_8B0X_104
- Geometric discrepancy: 0.1336
- The information below is about IL_8B0X_104
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.4
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 5
Unit IDs
9TI6|1|A|C|1087
9TI6|1|A|C|1088
9TI6|1|A|C|1089
9TI6|1|A|A|1090
9TI6|1|A|G|1091
9TI6|1|A|A|1092
9TI6|1|A|C|1093
9TI6|1|A|A|1094
9TI6|1|A|A|1095
*
9TI6|1|A|U|1152
9TI6|1|A|C|1153
9TI6|1|A|G|1154
9TI6|1|A|A|1155
9TI6|1|A|G|1156
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain K
- Large ribosomal subunit protein uL6
Coloring options: