IL_9TI6_047
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- CGUUGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 9TI6|1|A|U|1249
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI6_047 not in the Motif Atlas
- Homologous match to IL_7A0S_043
- Geometric discrepancy: 0.1716
- The information below is about IL_7A0S_043
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90775.3
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 30
Unit IDs
9TI6|1|A|C|1246
9TI6|1|A|G|1247
9TI6|1|A|U|1248
9TI6|1|A|U|1249
9TI6|1|A|G|1250
9TI6|1|A|A|1251
9TI6|1|A|A|1252
9TI6|1|A|G|1253
*
9TI6|1|A|U|1272
9TI6|1|A|G|1273
9TI6|1|A|G|1274
9TI6|1|A|A|1275
9TI6|1|A|G|1276
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain T
- 50S ribosomal protein L20
Coloring options: