IL_9TI6_094
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI6_094 not in the Motif Atlas
- Homologous match to IL_7A0S_087
- Geometric discrepancy: 0.1483
- The information below is about IL_7A0S_087
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9TI6|1|A|C|2493
9TI6|1|A|C|2494
9TI6|1|A|A|2495
9TI6|1|A|A|2496
9TI6|1|A|G|2497
*
9TI6|1|A|C|2507
9TI6|1|A|G|2508
9TI6|1|A|A|2509
9TI6|1|A|C|2510
9TI6|1|A|G|2511
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain P
- 50S ribosomal protein L16
Coloring options: