IL_9TI7_145

3D structure

PDB id

9TI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

GUG*UAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TI7_145 not in the Motif Atlas

Geometric match to IL_8CRE_403

Geometric discrepancy: 0.2783

The information below is about IL_8CRE_403

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.4

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

25

Unit IDs

9TI7|1|a|G|664
9TI7|1|a|U|665
9TI7|1|a|G|666
*
9TI7|1|a|U|755
9TI7|1|a|A|756
9TI7|1|a|A|757
9TI7|1|a|C|758

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S15