IL_9TI8_039
3D structure
- PDB id
- 9TI8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 50S ribosome in complex with RRF, EF-G and fusidic acid (50S-RRF-EF-G-FA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.18 Å
Loop
- Sequence
- UUAAGUG*CUAAA
- Length
- 12 nucleotides
- Bulged bases
- 9TI8|1|A|A|1187
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI8_039 not in the Motif Atlas
- Homologous match to IL_7A0S_036
- Geometric discrepancy: 0.3139
- The information below is about IL_7A0S_036
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.6
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 6
Unit IDs
9TI8|1|A|U|1062
9TI8|1|A|U|1063
9TI8|1|A|A|1064
9TI8|1|A|A|1065
9TI8|1|A|G|1066
9TI8|1|A|U|1067
9TI8|1|A|G|1068
*
9TI8|1|A|C|1184
9TI8|1|A|U|1185
9TI8|1|A|A|1186
9TI8|1|A|A|1187
9TI8|1|A|A|1188
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain K
- Large ribosomal subunit protein uL6
- Chain M
- 50S ribosomal protein L13
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