IL_9TI8_054
3D structure
- PDB id
- 9TI8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 50S ribosome in complex with RRF, EF-G and fusidic acid (50S-RRF-EF-G-FA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.18 Å
Loop
- Sequence
- UGAGG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI8_054 not in the Motif Atlas
- Homologous match to IL_7A0S_049
- Geometric discrepancy: 0.2162
- The information below is about IL_7A0S_049
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.3
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9TI8|1|A|U|1394
9TI8|1|A|G|1395
9TI8|1|A|A|1396
9TI8|1|A|G|1397
9TI8|1|A|G|1398
*
9TI8|1|A|C|1407
9TI8|1|A|G|1408
9TI8|1|A|U|1409
9TI8|1|A|A|1410
9TI8|1|A|G|1411
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L28
- Chain 7
- 50S ribosomal protein L34
- Chain G
- 50S ribosomal protein L2
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