IL_9TI8_066

3D structure

PDB id

9TI8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S ribosome in complex with RRF, EF-G and fusidic acid (50S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.18 Å

Loop

Sequence

GGAA*UC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TI8_066 not in the Motif Atlas

Geometric match to IL_8B0X_125

Geometric discrepancy: 0.0416

The information below is about IL_8B0X_125

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74641.4

Basepair signature

cWW-tSH-cWW-L

Number of instances in this motif group

36

Unit IDs

9TI8|1|A|G|1710
9TI8|1|A|G|1711
9TI8|1|A|A|1712
9TI8|1|A|A|1713
*
9TI8|1|A|U|2020
9TI8|1|A|C|2021

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L3

Chain N

50S ribosomal protein L14