IL_9TI9_146
3D structure
- PDB id
- 9TI9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- UGUAG*CGCAGAGA
- Length
- 13 nucleotides
- Bulged bases
- 9TI9|1|a|A|710, 9TI9|1|a|G|711
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TI9_146 not in the Motif Atlas
- Geometric match to IL_4V9F_031
- Geometric discrepancy: 0.2988
- The information below is about IL_4V9F_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9TI9|1|a|U|692
9TI9|1|a|G|693
9TI9|1|a|U|694
9TI9|1|a|A|695
9TI9|1|a|G|696
*
9TI9|1|a|C|707
9TI9|1|a|G|708
9TI9|1|a|C|709
9TI9|1|a|A|710
9TI9|1|a|G|711
9TI9|1|a|A|712
9TI9|1|a|G|713
9TI9|1|a|A|714
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 30S ribosomal protein S11
Coloring options: