IL_9TI9_152

3D structure

PDB id

9TI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

GCA*UUCCC

Length

8 nucleotides

Bulged bases

9TI9|1|a|C|943

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TI9_152 not in the Motif Atlas

Homologous match to IL_6CZR_410

Geometric discrepancy: 0.3166

The information below is about IL_6CZR_410

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47078.2

Basepair signature

cWW-cWS-L-cWW-L

Number of instances in this motif group

6

Unit IDs

9TI9|1|a|G|942
9TI9|1|a|C|943
9TI9|1|a|A|944
*
9TI9|1|a|U|1390
9TI9|1|a|U|1391
9TI9|1|a|C|1392
9TI9|1|a|C|1393
9TI9|1|a|C|1394

Current chains

Chain a

16S rRNA

Nearby chains

Chain h

30S ribosomal protein S7

Chain j

30S ribosomal protein S9