IL_9TI9_168

3D structure

PDB id

9TI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

G(4OC)CC*G(UR3)AAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 4OC, UR3

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9TI9_168 not in the Motif Atlas

Geometric match to IL_8CRE_467

Geometric discrepancy: 0.2842

The information below is about IL_8CRE_467

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25873.4

Basepair signature

cWW-cSH-cWS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

9TI9|1|a|G|1411
9TI9|1|a|4OC|1412
9TI9|1|a|C|1413
9TI9|1|a|C|1414
*
9TI9|1|a|G|1508
9TI9|1|a|UR3|1509
9TI9|1|a|A|1510
9TI9|1|a|A|1511
9TI9|1|a|C|1512

Current chains

Chain a

16S rRNA

Nearby chains