IL_9TKO_003

3D structure

PDB id

9TKO (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S pre-initiation complex with IF2 bound (30S PIC-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUAAC*GGG

Length

9 nucleotides

Bulged bases

9TKO|1|D1|C|48, 9TKO|1|D1|A|51

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TKO|1|D1|C|47
9TKO|1|D1|C|48
9TKO|1|D1|U|49
9TKO|1|D1|A|50
9TKO|1|D1|A|51
9TKO|1|D1|C|52
*
9TKO|1|D1|G|359
9TKO|1|D1|G|360
9TKO|1|D1|G|361

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AK

Small ribosomal subunit protein uS12

Chain F2

Translation initiation factor IF-2