RNA 3D Hub //

9TKO Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_9TKO_0011/D1/12:22No text annotation
HL_9TKO_0031/D1/158:163No text annotation
HL_9TKO_0041/D1/186:191No text annotation
HL_9TKO_0051/D1/207:212No text annotation
HL_9TKO_0061/D1/259:267No text annotation
HL_9TKO_0071/D1/296:301No text annotation
HL_9TKO_0081/D1/320:333No text annotation
HL_9TKO_0091/D1/342:347No text annotation
HL_9TKO_0101/D1/379:384No text annotation
HL_9TKO_0111/D1/419:424No text annotation
HL_9TKO_0121/D1/462:470No text annotation
HL_9TKO_0131/D1/522:527No text annotation
HL_9TKO_0141/D1/617:623No text annotation
HL_9TKO_0151/D1/689:698No text annotation
HL_9TKO_0161/D1/726:731No text annotation
HL_9TKO_0171/D1/786:796No text annotation
HL_9TKO_0191/D1/862:867No text annotation
HL_9TKO_0201/D1/897:902No text annotation
HL_9TKO_0211/D1/963:972No text annotation
HL_9TKO_0221/D1/1012:1017No text annotation
HL_9TKO_0241/D1/1076:1081No text annotation
HL_9TKO_0251/D1/1089:1096No text annotation
HL_9TKO_0261/D1/1134:1140No text annotation
HL_9TKO_0271/D1/1165:1171No text annotation
HL_9TKO_0281/D1/1265:1270No text annotation
HL_9TKO_0291/D1/1314:1323No text annotation
HL_9TKO_0301/D1/1356:1366No text annotation
HL_9TKO_0311/D1/1449:1454No text annotation
HL_9TKO_0321/D1/1515:1520No text annotation
HL_9TKO_0341/D5/31:39No text annotation

Problematic loops

#loop idProblemSequence
HL_9TKO_002No text annotation
HL_9TKO_018No text annotation
HL_9TKO_023No text annotation
HL_9TKO_033No text annotation
HL_9TKO_035No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_9TKO_0011/D1/30:32,
1/D1/552:553		No text annotation
IL_9TKO_0021/D1/44:45,
1/D1/396:398		No text annotation
IL_9TKO_0031/D1/47:52,
1/D1/359:361		No text annotation
IL_9TKO_0041/D1/54:56,
1/D1/356:357		No text annotation
IL_9TKO_0051/D1/63:66,
1/D1/103:104		No text annotation
IL_9TKO_0061/D1/67:69,
1/D1/99:102		No text annotation
IL_9TKO_0071/D1/70:73,
1/D1/97:98		No text annotation
IL_9TKO_0081/D1/75:76,
1/D1/93:95		No text annotation
IL_9TKO_0091/D1/128:131,
1/D1/231:233		No text annotation
IL_9TKO_0101/D1/132:136,
1/D1/227:230		No text annotation
IL_9TKO_0111/D1/144:146,
1/D1/176:178		No text annotation
IL_9TKO_0121/D1/147:153,
1/D1/168:175		No text annotation
IL_9TKO_0131/D1/203:206,
1/D1/213:214		No text annotation
IL_9TKO_0141/D1/242:247,
1/D1/277:284		No text annotation
IL_9TKO_0151/D1/249:252,
1/D1/274:275		No text annotation
IL_9TKO_0161/D1/292:293,
1/D1/304:308		No text annotation
IL_9TKO_0171/D1/367:369,
1/D1/392:393		No text annotation
IL_9TKO_0181/D1/371:375,
1/D1/389:390		No text annotation
IL_9TKO_0191/D1/375:376,
1/D1/387:389		No text annotation
IL_9TKO_0201/D1/409:416,
1/D1/427:433		No text annotation
IL_9TKO_0211/D1/440:442,
1/D1/492:497		No text annotation
IL_9TKO_0221/D1/446:450,
1/D1/483:488		No text annotation
IL_9TKO_0231/D1/450:455,
1/D1/477:483		No text annotation
IL_9TKO_0241/D1/504:511,
1/D1/540:541		No text annotation
IL_9TKO_0251/D1/515:521,
1/D1/528:536		No text annotation
IL_9TKO_0261/D1/569:575,
1/D1/880:881		No text annotation
IL_9TKO_0271/D1/580:584,
1/D1/757:761		No text annotation
IL_9TKO_0281/D1/594:596,
1/D1/644:645		No text annotation
IL_9TKO_0291/D1/597:598,
1/D1/640:643		No text annotation
IL_9TKO_0301/D1/605:612,
1/D1/628:633		No text annotation
IL_9TKO_0311/D1/654:655,
1/D1/751:754		No text annotation
IL_9TKO_0321/D1/659:660,
1/D1/745:747		No text annotation
IL_9TKO_0331/D1/662:666,
1/D1/740:743		No text annotation
IL_9TKO_0341/D1/673:678,
1/D1/712:717		No text annotation
IL_9TKO_0351/D1/684:688,
1/D1/699:706		No text annotation
IL_9TKO_0361/D1/774:778,
1/D1/804:805		No text annotation
IL_9TKO_0371/D1/779:783,
1/D1/799:803		No text annotation
IL_9TKO_0381/D1/887:894,
1/D1/905:910		No text annotation
IL_9TKO_0391/D1/922:923,
1/D1/1393:1395		No text annotation
IL_9TKO_0401/D1/925:927,
1/D1/1390:1391		No text annotation
IL_9TKO_0411/D1/933:935,
1/D1/1380:1384		No text annotation
IL_9TKO_0421/D1/953:954,
1/D1/1226:1228		No text annotation
IL_9TKO_0431/D1/993:997,
1/D1/1044:1045		No text annotation
IL_9TKO_0441/D1/998:999,
1/D1/1041:1043		No text annotation
IL_9TKO_0451/D1/1048:1050,
1/D1/1208:1209		No text annotation
IL_9TKO_0461/D1/1052:1056,
1/D1/1204:1206		No text annotation
IL_9TKO_0471/D1/1057:1058,
1/D1/1199:1203		No text annotation
IL_9TKO_0481/D1/1060:1061,
1/D1/1195:1197		No text annotation
IL_9TKO_0491/D1/1061:1063,
1/D1/1193:1195		No text annotation
IL_9TKO_0501/D1/1124:1128,
1/D1/1144:1149		No text annotation
IL_9TKO_0511/D1/1129:1132,
1/D1/1142:1143		No text annotation
IL_9TKO_0521/D1/1158:1161,
1/D1/1175:1181		No text annotation
IL_9TKO_0531/D1/1247:1253,
1/D1/1284:1290		No text annotation
IL_9TKO_0541/D1/1255:1258,
1/D1/1277:1282		No text annotation
IL_9TKO_0551/D1/1259:1263,
1/D1/1272:1276		No text annotation
IL_9TKO_0561/D1/1303:1308,
1/D1/1329:1334		No text annotation
IL_9TKO_0571/D1/1399:1401,
1/D1/1501:1504		No text annotation
IL_9TKO_0581/D1/1401:1404,
1/D1/1497:1501		No text annotation
IL_9TKO_0591/D1/1405:1407,
1/D1/1494:1496		No text annotation
IL_9TKO_0601/D1/1407:1409,
1/D1/1491:1494		No text annotation
IL_9TKO_0611/D1/1412:1414,
1/D1/1486:1488		No text annotation
IL_9TKO_0621/D1/1416:1419,
1/D1/1481:1484		No text annotation
IL_9TKO_0631/D1/1430:1435,
1/D1/1466:1470		No text annotation
IL_9TKO_0641/D1/1440:1442,
1/D1/1460:1461		No text annotation
IL_9TKO_0651/D1/1445:1448,
1/D1/1455:1457		No text annotation

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_9TKO_0011/D1/46:47,
1/D1/361:367,
1/D1/393:395		No text annotation
J3_9TKO_0021/D1/46:52,
1/D1/359:367,
1/D1/393:395		No text annotation
J3_9TKO_0031/D1/586:588,
1/D1/651:654,
1/D1/754:755		No text annotation
J3_9TKO_0041/D1/586:588,
1/D1/651:655,
1/D1/751:755		No text annotation
J3_9TKO_0051/D1/672:673,
1/D1/717:725,
1/D1/732:734		No text annotation
J3_9TKO_0061/D1/826:829,
1/D1/857:861,
1/D1/868:874		No text annotation
J3_9TKO_0071/D1/936:939,
1/D1/1344:1350,
1/D1/1372:1379		No text annotation
J3_9TKO_0081/D1/943:946,
1/D1/1235:1237,
1/D1/1337:1340		No text annotation
J3_9TKO_0091/D1/955:962,
1/D1/973:984,
1/D1/1221:1225		No text annotation
J3_9TKO_0101/D1/990:993,
1/D1/1045:1047,
1/D1/1210:1215		No text annotation
J3_9TKO_0111/D1/990:997,
1/D1/1044:1047,
1/D1/1210:1215		No text annotation
J3_9TKO_0121/D1/1003:1006,
1/D1/1023:1028,
1/D1/1033:1037		No text annotation
J3_9TKO_0131/D1/1063:1068,
1/D1/1107:1113,
1/D1/1187:1193		No text annotation
J3_9TKO_0141/D1/1073:1074,
1/D1/1083:1086,
1/D1/1099:1102		No text annotation
J3_9TKO_0151/D1/1116:1118,
1/D1/1155:1158,
1/D1/1181:1184		No text annotation
J3_9TKO_0161/D1/1116:1118,
1/D1/1155:1161,
1/D1/1175:1184		No text annotation
J3_9TKO_0171/D1/1237:1241,
1/D1/1296:1303,
1/D1/1334:1337		No text annotation
J4_9TKO_0011/D1/115:122,
1/D1/239:240,
1/D1/286:289,
1/D1/311:312		No text annotation
J4_9TKO_0021/D1/142:144,
1/D1/178:184,
1/D1/193:198,
1/D1/219:221		No text annotation
J4_9TKO_0031/D1/575:577,
1/D1/764:769,
1/D1/810:821,
1/D1/879:880		No text annotation
J4_9TKO_0041/D5/7:10,
1/D5/25:27,
1/D5/43:49,
1/D5/65:66		No text annotation
J5_9TKO_0011/D1/36:39,
1/D1/403:406,
1/D1/436:440,
1/D1/497:500,
1/D1/545:548		No text annotation
J5_9TKO_0021/D1/36:39,
1/D1/403:406,
1/D1/436:442,
1/D1/492:500,
1/D1/545:548		No text annotation
J5_9TKO_0031/D1/58:61,
1/D1/106:113,
1/D1/314:316,
1/D1/337:339,
1/D1/350:354		No text annotation

Problematic loops

No problematic loops


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