IL_9TKO_025
3D structure
- PDB id
- 9TKO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S pre-initiation complex with IF2 bound (30S PIC-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 9TKO|1|D1|A|532, 9TKO|1|D1|U|534, 9TKO|1|D1|A|535
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9TKO|1|D1|G|515
9TKO|1|D1|U|516
9TKO|1|D1|G|517
9TKO|1|D1|C|518
9TKO|1|D1|C|519
9TKO|1|D1|A|520
9TKO|1|D1|G|521
*
9TKO|1|D1|C|528
9TKO|1|D1|G|529
9TKO|1|D1|G|530
9TKO|1|D1|U|531
9TKO|1|D1|A|532
9TKO|1|D1|A|533
9TKO|1|D1|U|534
9TKO|1|D1|A|535
9TKO|1|D1|C|536
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AB
- Small ribosomal subunit protein uS3
- Chain AK
- Small ribosomal subunit protein uS12
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